Tuesday, September 17, 2013

Antibiotic resistance threats in the United States, 2013 THREAT REPORT

About 80 percent of all antibiotics distributed in the U.S. were for food animals, and CSPI has documented 55 foodborne illness outbreaks between 1973 and 2011 where the bacteria identified were resistant to at least one antibiotic. Thirty-four of those outbreaks occurred since 2000.

“Because of the link between antibiotic use in food-producing animals and the occurrence of antibiotic-resistant infections in humans, antibiotics should be used in food-producing animals only under veterinary oversight and only to manage and treat infectious diseases, not to promote growth,” reads the report.

“We continue to promote the concept that, if an animal is sick, using antibiotics to treat that animal is obviously important,” said CDC Director Dr. Tom Frieden. “We also know that there are specific situations in which the widespread use of antimicrobials in agriculture has resulted in an increase in resistant infections in humans.”



http://www.foodsafetynews.com/2013/09/drug-resistant-infections/#.Ujhl1owo4qQ





http://www.cdc.gov/drugresistance/threat-report-2013/





Threat Report 2013


This report, Antibiotic resistance threats in the United States, 2013 gives a first-ever snapshot of the burden and threats posed by the antibiotic-resistant germs having the most impact on human health. 

Each year in the United States, at least 2 million people become infected with bacteria that are resistant to antibiotics and at least 23,000 people die each year as a direct result of these infections. Many more people die from other conditions that were complicated by an antibiotic-resistant infection.

Antibiotic-resistant infections can happen anywhere. Data show that most happen in the general community; however, most deaths related to antibiotic resistance happen in healthcare settings such as hospitals and nursing homes.

What's in the Report

Foreword Adobe PDF file [page 5]
Executive Summary Adobe PDF file [page 6]
Section 1: The Threat of Antibiotic Resistance Adobe PDF file [page 11]
Section 2: Fighting Back Against Antibiotic Resistance Adobe PDF file [page 31]
Four Core Actions to Prevent Antibiotic Resistance Adobe PDF file [page 31]
Section 3: Current Antibiotic Resistance Threats in the United States,
by Microorganism
 Adobe PDF file [page 49]
Microorganisms with a Threat Level of Urgent

Microorganisms with a Threat Level of Serious

Microorganisms with a Threat Level of Concerning
Technical Appendix Adobe PDF file [page 93]
Glossary Adobe PDF file [page 107]
Acknowledgements Adobe PDF file [page 112]
 

Download the 2013 Report now » Adobe PDF file [PDF - 114 pages 4.18mb]
 
http://www.cdc.gov/drugresistance/threat-report-2013/pdf/ar-threats-2013-508.pdf

http://www.cdc.gov/drugresistance/threat-report-2013/

 
 
Tuesday, July 16, 2013
 
Livestock-Associated Methicillin and Multidrug Resistant Staphylococcus aureus Is Present among Industrial, Not Antibiotic-Free Livestock Operation Workers in North Carolina
 
Research Article
 
 
 
 
Wednesday, January 2, 2013
 
New MRSA ST398 superbug strain found in UK milk Occupational risk factor
 
Rapid communications
 
 
 
 
Thursday, March 1, 2012
 
Staphylococcus aureus CC398: Host Adaptation and Emergence of Methicillin Resistance in Livestock
 
 
 
 
Thursday, February 9, 2012
 
Occurrence and distribution of Staphylococcus aureuslineages among zoo animals
 
 
 
 
Tuesday, January 17, 2012
 
In-feed antibiotic effects on the swine intestinal microbiome
 
 
 
 
Thursday, June 9, 2011
 
New Superbug Found in Cows and People
 
 
 
 
Wednesday, May 11, 2011
 
Methicillin-resistant Staphylococcus aureus in Retail Meat, Detroit, Michigan, USA
 
 
 
 
Monday, April 18, 2011
 
Multidrug-Resistant Staphylococcus aureus in US Meat and Poultry
 
 
 
 
that MRSA is some nasty stuff. damn near killed me in 2001 after one of my neck surgeries. 8 weeks vancomycin via long PIC line straight to the heart. nasty, nasty stuff. ...


 
 

 
 
 
TSS
 

Tuesday, July 16, 2013

Livestock-Associated Methicillin and Multidrug Resistant Staphylococcus aureus Is Present among Industrial, Not Antibiotic-Free Livestock Operation Workers in North Carolina

Research Article

 

 

Livestock-Associated Methicillin and Multidrug Resistant Staphylococcus aureus Is Present among Industrial, Not Antibiotic-Free Livestock Operation Workers in North Carolina

 

 

Jessica L. Rinsky equal contributor, equal contributor Contributed equally to this work with: Jessica L. Rinsky, Maya Nadimpalli

 

Affiliation: Department of Epidemiology, University of North Carolina, Chapel Hill, North Carolina, United States of America

 

X Maya Nadimpalli equal contributor, equal contributor Contributed equally to this work with: Jessica L. Rinsky, Maya Nadimpalli

 

Affiliation: Department of Environmental Sciences and Engineering, University of North Carolina, Chapel Hill, North Carolina, United States of America

 

X Steve Wing, Affiliation: Department of Epidemiology, University of North Carolina, Chapel Hill, North Carolina, United States of America

 

X Devon Hall, Affiliation: Rural Empowerment Association for Community Help (REACH), Warsaw, North Carolina, United States of America

 

X Dothula Baron, Affiliation: Rural Empowerment Association for Community Help (REACH), Warsaw, North Carolina, United States of America

 

X Lance B. Price, Affiliation: Department of Environmental and Occupational Health, George Washington University, Washington, District of Columbia, United States of America

 

X Jesper Larsen, Affiliation: Microbiology and Infection Control, Statens Serum Institut, Copenhagen, Denmark

 

X Marc Stegger, Affiliation: Microbiology and Infection Control, Statens Serum Institut, Copenhagen, Denmark

 

X Jill Stewart, Affiliation: Department of Environmental Sciences and Engineering, University of North Carolina, Chapel Hill, North Carolina, United States of America

 

X Christopher D. Heaney mail * E-mail: cheaney@jhsph.edu

 

 

Affiliations: Department of Environmental Health Sciences, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, Maryland, United States of America, Department of Epidemiology, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, Maryland, United States of America

 

 

 

 

 

Abstract

 

 

Objectives Administration of antibiotics to food animals may select for drug-resistant pathogens of clinical significance, such as methicillin-resistant Staphylococcus aureus (MRSA). In the United States, studies have examined prevalence of MRSA carriage among individuals exposed to livestock, but prevalence of multidrug-resistant S. aureus (MDRSA) carriage and the association with livestock raised with versus without antibiotic selective pressure remains unclear. We aimed to examine prevalence, antibiotic susceptibility, and molecular characteristics of S. aureus among industrial livestock operation (ILO) and antibiotic-free livestock operation (AFLO) workers and household members in North Carolina.

 

Methods Participants in this cross-sectional study were interviewed and provided a nasal swab for S. aureus analysis. Resulting S. aureus isolates were assessed for antibiotic susceptibility, multi-locus sequence type, and absence of the scn gene (a marker of livestock association).

 

Results Among 99 ILO and 105 AFLO participants, S. aureus nasal carriage prevalence was 41% and 40%, respectively. Among ILO and AFLO S. aureus carriers, MRSA was detected in 7% (3/41) and 7% (3/42), respectively. Thirty seven percent of 41 ILO versus 19% of 42 AFLO S. aureus-positive participants carried MDRSA. S. aureus clonal complex (CC) 398 was observed only among workers and predominated among ILO (13/34) compared with AFLO (1/35) S. aureus-positive workers. Only ILO workers carried scn-negative MRSA CC398 (2/34) and scn-negative MDRSA CC398 (6/34), and all of these isolates were tetracycline resistant.

 

Conclusions Despite similar S. aureus and MRSA prevalence among ILO and AFLO-exposed individuals, livestock-associated MRSA and MDRSA (tetracycline-resistant, CC398, scn-negative) were only present among ILO-exposed individuals. These findings support growing concern about antibiotics use and confinement in livestock production, raising questions about the potential for occupational exposure to an opportunistic and drug-resistant pathogen, which in other settings including hospitals and the community is of broad public health importance.

 

 

snip...

 

 

The results reported here show that the proportion of S. aureus identified as MDRSA and the proportion exhibiting phenotypic and molecular markers of livestock association was elevated among individuals exposed to the ILO environment compared to those exposed to the AFLO environment. Carriage of scn-negative MRSA CC398 and scn-negative MDRSA CC398 was limited to individuals with direct exposure to ILO production – all of these isolates were also resistant to tetracycline. Whether or not these livestock-associated S. aureus strains (including MRSA and MDRSA) pose a health risk to workers and the broader public requires further investigation. Overall, our findings support growing concern about antibiotic use and confinement in livestock production, and raise questions about the potential for occupational exposure to an opportunistic and drug-resistant pathogen which in other settings including hospitals and the community is a major cause of morbidity and mortality in the United States [4], [61] and globally [6], [7].

 

 

 

Citation: Rinsky JL, Nadimpalli M, Wing S, Hall D, Baron D, et al. (2013) Livestock-Associated Methicillin and Multidrug Resistant Staphylococcus aureus Is Present among Industrial, Not Antibiotic-Free Livestock Operation Workers in North Carolina. PLoS ONE 8(7): e67641. doi:10.1371/journal.pone.0067641

 

Editor: Axel Cloeckaert, Institut National de la Recherche Agronomique, France

 

Received: February 19, 2013; Accepted: May 20, 2013; Published: July 2, 2013

 

Copyright: © 2013 Rinsky et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

 

Funding: Funding for this study was provided by the North Carolina Translational and Clinical Sciences Institute, North Carolina Occupational Safety and Health Education and Research Center, the W.K. Kellogg Health Scholars Program – Community Track, and a Gillings Innovation Laboratory award from the UNC Gillings School of Global Public Health. CDH was supported by the W.K. Kellogg Health Scholars Program – Community Track, JLR by the National Institute of Environmental Health Sciences (NIEHS; award no. T32ES007018), and MN by a Royster Society fellowship and an EPA Science to Achieve Results fellowship. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

 

Competing interests: SW provided pro bono testimony in legal proceedings related to landfills and provided pro bono consultation on radiation and health for two law firms that made gifts to the University of North Carolina and another law firm that did not make a gift to the University of North Carolina. He conducted research on epidemiologic investigation of symptoms reported by neighbors of areas where sewage sludge is applied to land funded by the Water Environment Research Foundation. This does not alter the authors' adherence to all the PLOS ONE policies on sharing data and materials.

 

 


 

 

 

Wednesday, January 2, 2013

 

New MRSA ST398 superbug strain found in UK milk Occupational risk factor

 

Rapid communications

 


 

 

 

Thursday, March 1, 2012

 

Staphylococcus aureus CC398: Host Adaptation and Emergence of Methicillin Resistance in Livestock

 


 

 

 

Thursday, February 9, 2012

 

Occurrence and distribution of Staphylococcus aureuslineages among zoo animals

 


 

 

 

Tuesday, January 17, 2012

 

In-feed antibiotic effects on the swine intestinal microbiome

 


 

 

 

Thursday, June 9, 2011

 

New Superbug Found in Cows and People

 


 

 

 

Wednesday, May 11, 2011

 

Methicillin-resistant Staphylococcus aureus in Retail Meat, Detroit, Michigan, USA

 


 

 

 

Monday, April 18, 2011

 

Multidrug-Resistant Staphylococcus aureus in US Meat and Poultry

 


 

 

 

 

that MRSA is some nasty stuff. damn near killed me in 2001 after one of my neck surgeries. 8 weeks vancomycin via long PIC line. ...

 

 


 

 

 

 

TSS

Thursday, April 4, 2013

Whole genome sequencing identifies zoonotic transmission of MRSA isolates with the novel mecA homologue mecC

Whole genome sequencing identifies zoonotic transmission of MRSA isolates with the novel mecA homologue mecC




Ewan M. Harrison1, Gavin K. Paterson1, Matthew T.G. Holden2, Jesper Larsen3, Marc Stegger3, Anders Rhod Larsen3, Andreas Petersen3, Robert L. Skov3, Judit Marta Christensen4, Anne Bak Zeuthen4, Ole Heltberg4, Simon R. Harris2, Ruth N. Zadoks5, Julian Parkhill2, Sharon J. Peacock2,6, Mark A. Holmes1*




Keywords: cattle; mecC; MRSA; sheep; zoonosis




DOI 10.1002/emmm.201202413 Received December 21, 2012 Revised February 06, 2013 Accepted February 08, 2013 GSee accompanying article http://dx.doi.org/10.1002/emmm.201302622





Several methicillin-resistant Staphylococcus aureus (MRSA) lineages that carry a novel mecA homologue (mecC) have recently been described in livestock and humans. In Denmark, two independent human cases of mecC-MRSA infection have been linked to a livestock reservoir. We investigated the molecular epidemiology of the associated MRSA isolates using whole genome sequencing (WGS). Single nucleotide polymorphisms (SNP) were defined and compared to a reference genome to place the isolates into a phylogenetic context. Phylogenetic analysis revealed two distinct farm-specific clusters comprising isolates from the human case and their own livestock, whereas human and animal isolates from the same farm only differed by a small number of SNPs, which supports the likelihood of zoonotic transmission. Further analyses identified a number of genes and mutations that may be associated with host interaction and virulence. This study demonstrates that mecC-MRSA ST130 isolates are capable of transmission between animals and humans, and underscores the potential of WGS in epidemiological investigations and source tracking of bacterial infections.





The paper explained




PROBLEM:




The emergence of livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA) is a major public health concern. Recently, MRSA strains with a novel mecA homologue (mecC), which may go undetected by current diagnostic tests, were described in both livestock and humans suggesting potential zoonotic transmission. Denmark has reported a significant increase in cases of CC130 mecC-MRSA between 2003 and 2011 and two independent human cases of mecC-MRSA infection directly linked to a livestock reservoir have been identified.




RESULTS:




We investigated the molecular epidemiology of these livestockassociated mecC-MRSA cases using WGS. Phylogenetic analysis across the entire core genome revealed that the isolates from these cases form two distinct, farm-specific clusters comprising near identical isolates from the human case and from livestock on that farm. Within each cluster, the human and animal isolates only differed by a small number of SNPs, which supports the premise of zoonotic transmission. In-depth genome analysis identified a number of candidate genes and mutations that may be associated with host–pathogen interactions and virulence of this emerging MRSA clone.




IMPACT:




Our findings demonstrate that the CC130 MRSA lineage is capable of transmission between animals and humans, further highlighting the role of livestock as a reservoir for MRSA. Our study also underscores the potential of WGS in epidemiological investigations and source tracking of bacterial infections.















TSS